CDS

Accession Number TCMCG057C14022
gbkey CDS
Protein Id XP_018475389.1
Location join(26206880..26206903,26206997..26207200,26207338..26207491,26207571..26207659,26208012..26208066,26208223..26208308,26208455..26208613)
Gene LOC108846682
GeneID 108846682
Organism Raphanus sativus

Protein

Length 256aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018619887.1
Definition PREDICTED: photosynthetic NDH subunit of lumenal location 5, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03110        [VIEW IN KEGG]
KEGG_ko ko:K03768        [VIEW IN KEGG]
EC 5.2.1.8        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000413        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003755        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009533        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010275        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016859        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018208        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0019901        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031977        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043424        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACCTTCTCGATGACTCTGTCAAATCCGAGGTCGTTCTCAGCTTCTCCACGAAGACTTTCTCCAATCAACACCTCTTCTACCACTTTCCGATTGAATTTGAACGCCAAGTCCACCTTCGACTCCATCAAGTTCCCGTCTTTAACCGCCTCATCGCTCCTCCTTCATACATCTTCTTCCACCAGAAGCAACCGCCGCTGCTTATCTGTTCAATCCAGTGCTGAGCCTTTAGCCGAGCCGCAATCGAAGATAACGCACAAGGTGTATTTCGATATAAGTGTTGGGAACCCAGTGGGGAAATTAGCTGGGAGGATTGTGATTGGTTTGTTTGGTGATGACGTTCCCCAAACTGTTGAGAACTTCCGTGCTCTTTGTACTGGTGAGAAGGGTTTTGGATACAAGGGTTCAACTTTCCACCGTGTCATCAGAGATTTCATGATTCAGGGTGGAGACTTTGACAAGGGCAATGGAACTGGAGGTAAAAGTGTATATGGCCGGACATTCAAGGATGAGAATTTCAATTTATCCCATGTCGGACCAGGAGTTGTGAGTATGGCAAATGCTGGCCCTAATACAAATGGAAGTCAGTTCTTCATCTGCACTGTTAAGACGTCATGGTTGGACGGGAGGCATGTGGTGTTCGGGCAAGTTATAGAAGGAATGGATGTGGTGAGGCTTATAGAGGAACAAGAGACGGACAGAGGCGACCGTCCCAGGAAGAAAGTGATCATTGCAGACTGTGGTCAACTTCCAATGTCTGAAGCTTAA
Protein:  
MATFSMTLSNPRSFSASPRRLSPINTSSTTFRLNLNAKSTFDSIKFPSLTASSLLLHTSSSTRSNRRCLSVQSSAEPLAEPQSKITHKVYFDISVGNPVGKLAGRIVIGLFGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFDKGNGTGGKSVYGRTFKDENFNLSHVGPGVVSMANAGPNTNGSQFFICTVKTSWLDGRHVVFGQVIEGMDVVRLIEEQETDRGDRPRKKVIIADCGQLPMSEA